Welcome to MagellanMapper’s documentation!

Contents:

• Installation of MagellanMapper
  • Table of Contents
  • Installation Options
  • Update MagellanMapper
  • Dependencies
  • Uninstallation
  • Build Documentation
  • Tested Platforms
  • Troubleshooting
  • Obsolete Issues
• Load MagellanMapper and Image Files
  • Start MagellanMapper
  • Import images
  • Load TIF files directly
  • Using the CLI
• Image Viewers in MagellanMapper
  • Region of Interest (ROI) Editor
  • Atlas Editor
  • 3D viewer
• Command-Line Interface for MagellanMapper
  • Command-Line argument reference
  • Changes in MagellanMapper v1.6
  • Changes in MagellanMapper v1.5
  • Changes in MagellanMapper v1.4
  • Changes in MagellanMapper v1.3
• Settings in MagellanMapper
  • User Application Folder
  • GUI Parameters
  • Command-Line Arguments
  • Profiles
• Running Pipelines in MagellanMapper
  • Vignette
  • Start a processing pipeline
• Tools for AWS Cloud Management in MagellanMapper
  • Dependencies
  • Launch EC2 Instances
  • Set Up Volumes
  • Set Up a Server with MagellanMapper
• Releases
• API documentation

Indices and tables

• Index

• Module Index

• Search Page